| Protein | Protocadherin-9 |
| Gene | PCDH9 |
| Status | Reviewed |
| Source | Breast cancer xenografts; Cerebrospinal fluid; DLBCL cell lines (Diffuse large B-cell lymphoma); HEK293 cell line (embryonic kidney); Liver; Lymphocytes; Ovarian tumor; Platelet; Prostate; Prostate tumor; Serum; Urine; UrineJurkat T cell line |
| Years | 2007-2015 |
| Site | Identified Peptides | Year(Publication ID) |
|---|---|---|
| 48 | DInISHINAATGTSASIVYR | 2014(16); |
| 48 | DLnISHINAATGTSASLVYR | 2007(unpublished);2015(unpublished);2015;2015;2007;2007; |
| 148 | VInISIPENTLINSR | 2007(unpublished);2007(unpublished);2007; |
| 306 | IFAInNTTGIITVQR | 2014(16); |
| 306 | LFALnNTTGLITVQR | 2014(33); 2007(unpublished);2007(unpublished);2007(unpublished); |
| 307 | IFAINnTTGIITVQR | 2014(16); |
| 307 | LFALNnTTGLITVQR | 2014(33); 2007(unpublished);2007(unpublished);2007(unpublished); |
| 347 | ATVTInVTDVNDNPPNIDLR | 2007(unpublished);2007(unpublished); |
| 368 | YIISPInGTVYLSEK | 2007(unpublished);2007(unpublished); |
| 368 | YIISPInGTVYISEKDPVNTK | 2014(16); |
| 368 | YIISPInGTVYLSEKDPVNTK | 2007(unpublished);2015(unpublished);2015(unpublished); |
| 450 | IVASDSGKPSInQTAIVR | 2014(16); |
| 450 | IVASDSGKPSLnQTALVR | 2007(13); 2014(15); 2014(33); 2014(unpublished);2015(unpublished);2015(unpublished);2015(unpublished);2015;2015;2007;2007;2007;2007; |
| 511 | NADIVYQLGPnASFFDLDR | 2007(unpublished);2007(unpublished); |
| 511 | NADIVYQIGPnASFFDIDRK | 2014(16); |
| 511 | NADIVYQLGPnASFFDLDRK | 2015(unpublished);2015(unpublished); |
| 630 | SnVSFDR | 2014(14); 2014(33); 2015(unpublished); |
| 630 | SnVSFDRE | 2014(33); |
| 681 | VTINVMDVNDNSPVVISPPSnTSFK | 2015(unpublished);2015(unpublished);2015;2007;2007; |
| 734 | IDPVTGnITIEEKPAPTDVGIHR | 2014(16); |
| 734 | IDPVTGnITLEEKPAPTDVGLHR | 2007(13); 2014(33); 2014(unpublished);2015(unpublished);2015(unpublished);2007;2007;2007; |
| 754 | IVVnISDIGYPK | 2014(16); |
| 754 | LVVnISDLGYPK | 2007(33); 2014(unpublished);2015(unpublished);2015;2015;2007;2007; |
| 1207 | QYGSNEGHFNnGSHMTDIPLANLK | 2007(unpublished);2007(unpublished); |
| 1 | 11 | 21 | 31 | 41 | 51 | 61 | 71 | 81 | 91 |
| MDLRDFYLLA | ALIACLRLDS | AIAQELIYTI | REELPENVPI | GNIPKDLNIS | HINAATGTSA | SLVYRLVSKA | GDAPLVKVSS | STGEIFTTSN | RIDREKLCAG |
| 101 | 111 | 121 | 131 | 141 | 151 | 161 | 171 | 181 | 191 |
| ASYAEENECF | FELEVVILPN | DFFRLIKIKI | IVKDTNDNAP | MFPSPVINIS | IPENTLINSR | FPIPSATDPD | TGFNGVQHYE | LLNGQSVFGL | DIVETPEGEK |
| 201 | 211 | 221 | 231 | 241 | 251 | 261 | 271 | 281 | 291 |
| WPQLIVQQNL | DREQKDTYVM | KIKVEDGGTP | QKSSTAILQV | TVSDVNDNRP | VFKEGQVEVH | IPENAPVGTS | VIQLHATDAD | IGSNAEIRYI | FGAQVAPATK |
| 301 | 311 | 321 | 331 | 341 | 351 | 361 | 371 | 381 | 391 |
| RLFALNNTTG | LITVQRSLDR | EETAIHKVTV | LASDGSSTPA | RATVTINVTD | VNDNPPNIDL | RYIISPINGT | VYLSEKDPVN | TKIALITVSD | KDTDVNGKVI |
| 401 | 411 | 421 | 431 | 441 | 451 | 461 | 471 | 481 | 491 |
| CFIEREVPFH | LKAVYDNQYL | LETSSLLDYE | GTKEFSFKIV | ASDSGKPSLN | QTALVRVKLE | DENDNPPIFN | QPVIELSVSE | NNRRGLYLTT | ISATDEDSGK |
| 501 | 511 | 521 | 531 | 541 | 551 | 561 | 571 | 581 | 591 |
| NADIVYQLGP | NASFFDLDRK | TGVLTASRVF | DREEQERFIF | TVTARDNGTP | PLQSQAAVIV | TVLDENDNSP | KFTHNHFQFF | VSENLPKYST | VGVITVTDAD |
| 601 | 611 | 621 | 631 | 641 | 651 | 661 | 671 | 681 | 691 |
| AGENKAVTLS | ILNDNDNFVL | DPYSGVIKSN | VSFDREQQSS | YTFDVKATDG | GQPPRSSTAK | VTINVMDVND | NSPVVISPPS | NTSFKLVPLS | AIPGSVVAEV |
| 701 | 711 | 721 | 731 | 741 | 751 | 761 | 771 | 781 | 791 |
| FAVDVDTGMN | AELKYTIVSG | NNKGLFRIDP | VTGNITLEEK | PAPTDVGLHR | LVVNISDLGY | PKSLHTLVLV | FLYVNDTAGN | ASYIYDLIRR | TMETPLDRNI |
| 801 | 811 | 821 | 831 | 841 | 851 | 861 | 871 | 881 | 891 |
| GDSSQPYQNE | DYLTIMIAII | AGAMVVIVVI | FVTVLVRCRH | ASRFKAAQRS | KQGAEWMSPN | QENKQNKKKK | RKKRKSPKSS | LLNFVTIEES | KPDDAVHEPI |
| 901 | 911 | 921 | 931 | 941 | 951 | 961 | 971 | 981 | 991 |
| NGTISLPAEL | EEQSIGRFDW | GPAPPTTFKP | NSPDLAKHYK | SASPQPAFHL | KPDTPVSVKK | HHVIQELPLD | NTFVGGCDTL | SKRSSTSSDH | FSASECSSQG |
| 1001 | 1011 | 1021 | 1031 | 1041 | 1051 | 1061 | 1071 | 1081 | 1091 |
| GFKTKGPLHT | RQCNSHSKSD | NIPVTPQKCP | SSTGFHIQEN | EESHYESQRR | VTFHLPDGSQ | ESCSDSGLGD | HEPVGSGTLI | SHPLPLVQPQ | DEFYDQASPD |
| 1101 | 1111 | 1121 | 1131 | 1141 | 1151 | 1161 | 1171 | 1181 | 1191 |
| KRTEADGNSD | PNSDGPLGPR | GLAEATEMCT | QECLVLGHSD | NCWMPPGLGP | YQHPKSPLST | FAPQKEWVKK | DKLVNGHTLT | RAWKEDSNRN | QFNDRKQYGS |
| 1201 | 1211 | 1221 | 1231 | ||||||
| NEGHFNNGSH | MTDIPLANLK | SYKQAGGATE | SPKEHQL |
| ID | Publication |
|---|---|
| 13 | Yang W, Laeyendecker O, Wendel SK, Zhang B, Sun S, Zhou J-Y, Ao M, Moore RD, Jackson JB, Zhang H: Glycoproteomic Study Reveals Altered Plasma Proteins Associated with HIV Elite Suppressors. Theranostics 2014, 4:1153. |
| 14 | Liu Y, Chen J, Sethi A, Li QK, Chen L, Collins B, Gillet LC, Wollscheid B, Zhang H, Aebersold R: Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor aggressiveness. Molecular & Cellular Proteomics 2014, 13:1753-1768. |
| 15 | Chen R, Seebun D, Ye M, Zou H, Figeys D: Site-specific characterization of cell membrane N-glycosylation with integrated hydrophilic interaction chromatography solid phase extraction and LC-MS/MS. Journal of Proteomics 2014, 103:194-203. |
| 16 | Deeb SJ, Cox J, Schmidt-Supprian M, Mann M: N-linked Glycosylation Enrichment for In-depth Cell Surface Proteomics of Diffuse Large B-cell Lymphoma Subtypes. Molecular & Cellular Proteomics 2014, 13:240-251. |
| 33 | Zhu J, Sun Z, Cheng K, Chen R, Ye M, Xu B, Sun D, Wang L, Liu J, Wang F, Zou H: Comprehensive Mapping of Protein N-Glycosylation in Human Liver by Combining Hydrophilic Interaction Chromatography and Hydrazide Chemistry. Journal of Proteome Research 2014, 13:1713-1721. |