Detail


Protein	Trinucleotide repeat-containing gene 6B protein
Gene	TNRC6B
Status	Reviewed
Source	OVCAR-3 cell line (Ovarian cancer); Plasma; Urine
Years	2007-2015

Site	Identified Peptides	Year(Publication ID)
272	SDPKAKSVQSSnSTTENNNGLGNWR	2007(unpublished);
331	nSSAQVSTVGQTSR	2015(1);
382	NGNTNSLnLSSPNPMENKGMPFGMGLGN	2007(unpublished);
788	nASLASKGGWEDCK	2015(1);
788	WGEGGQNEIGTWGNGGnASLASK	2007(unpublished);
807	SPAWnETGR	2015(unpublished);2015(unpublished);
1055	QMKCSLKGGNnDSWMNPLAK	2015(8);

Sequence

1	11	21	31	41	51	61	71	81	91
MREKEQEREE	QLMEDKKRKK	EDKKKKEATQ	KVTEQKTKVP	EVTKPSLSQP	TAASPIGSSP	SPPVNGGNNA	KRVAVPNGQP	PSAARYMPRE	VPPRFRCQQD
101	111	121	131	141	151	161	171	181	191
HKVLLKRGQP	PPPSCMLLGG	GAGPPPCTAP	GANPNNAQVT	GALLQSESGT	APDSTLGGAA	ASNYANSTWG	SGASSNNGTS	PNPIHIWDKV	IVDGSDMEEW
201	211	221	231	241	251	261	271	281	291
PCIASKDTES	SSENTTDNNS	ASNPGSEKST	LPGSTTSNKG	KGSQCQSASS	GNECNLGVWK	SDPKAKSVQS	SNSTTENNNG	LGNWRNVSGQ	DRIGPGSGFS
301	311	321	331	341	351	361	371	381	391
NFNPNSNPSA	WPALVQEGTS	RKGALETDNS	NSSAQVSTVG	QTSREQQSKM	ENAGVNFVVS	GREQAQIHNT	DGPKNGNTNS	LNLSSPNPME	NKGMPFGMGL
401	411	421	431	441	451	461	471	481	491
GNTSRSTDAP	SQSTGDRKTG	SVGSWGAARG	PSGTDTVSGQ	SNSGNNGNNG	KEREDSWKGA	SVQKSTGSKN	DSWDNNNRST	GGSWNFGPQD	SNDNKWGEGN
501	511	521	531	541	551	561	571	581	591
KMTSGVSQGE	WKQPTGSDEL	KIGEWSGPNQ	PNSSTGAWDN	QKGHPLPENQ	GNAQAPCWGR	SSSSTGSEVG	GQSTGSNHKA	GSSDSHNSGR	RSYRPTHPDC
601	611	621	631	641	651	661	671	681	691
QAVLQTLLSR	TDLDPRVLSN	TGWGQTQIKQ	DTVWDIEEVP	RPEGKSDKGT	EGWESAATQT	KNSGGWGDAP	SQSNQMKSGW	GELSASTEWK	DPKNTGGWND
701	711	721	731	741	751	761	771	781	791
YKNNNSSNWG	GGRPDEKTPS	SWNENPSKDQ	GWGGGRQPNQ	GWSSGKNGWG	EEVDQTKNSN	WESSASKPVS	GWGEGGQNEI	GTWGNGGNAS	LASKGGWEDC
801	811	821	831	841	851	861	871	881	891
KRSPAWNETG	RQPNSWNKQH	QQQQPPQQPP	PPQPEASGSW	GGPPPPPPGN	VRPSNSSWSS	GPQPATPKDE	EPSGWEEPSP	QSISRKMDID	DGTSAWGDPN
901	911	921	931	941	951	961	971	981	991
SYNYKNVNLW	DKNSQGGPAP	REPNLPTPMT	SKSASVWSKS	TPPAPDNGTS	AWGEPNESSP	GWGEMDDTGA	STTGWGNTPA	NAPNAMKPNS	KSMQDGWGES
1001	1011	1021	1031	1041	1051	1061	1071	1081	1091
DGPVTGARHP	SWEEEEDGGV	WNTTGSQGSA	SSHNSASWGQ	GGKKQMKCSL	KGGNNDSWMN	PLAKQFSNMG	LLSQTEDNPS	SKMDLSVGSL	SDKKFDVDKR
1101	1111	1121	1131	1141	1151	1161	1171	1181	1191
AMNLGDFNDI	MRKDRSGFRP	PNSKDMGTTD	SGPYFEKLTL	PFSNQDGCLG	DEAPCSPFSP	SPSYKLSPSG	STLPNVSLGA	IGTGLNPQNF	AARQGGSHGL
1201	1211	1221	1231	1241	1251	1261	1271	1281	1291
FGNSTAQSRG	LHTPVQPLNS	SPSLRAQVPP	QFISPQVSAS	MLKQFPNSGL	SPGLFNVGPQ	LSPQQIAMLS	QLPQIPQFQL	ACQLLLQQQQ	QQQLLQNQRK
1301	1311	1321	1331	1341	1351	1361	1371	1381	1391
ISQAVRQQQE	QQLARMVSAL	QQQQQQQQRQ	PGMKHSPSHP	VGPKPHLDNM	VPNALNVGLP	DLQTKGPIPG	YGSGFSSGGM	DYGMVGGKEA	GTESRFKQWT
1401	1411	1421	1431	1441	1451	1461	1471	1481	1491
SMMEGLPSVA	TQEANMHKNG	AIVAPGKTRG	GSPYNQFDII	PGDTLGGHTG	PAGDSWLPAK	SPPTNKIGSK	SSNASWPPEF	QPGVPWKGIQ	NIDPESDPYV
1501	1511	1521	1531	1541	1551	1561	1571	1581	1591
TPGSVLGGTA	TSPIVDTDHQ	LLRDNTTGSN	SSLNTSLPSP	GAWPYSASDN	SFTNVHSTSA	KFPDYKSTWS	PDPIGHNPTH	LSNKMWKNHI	SSRNTTPLPR
1601	1611	1621	1631	1641	1651	1661	1671	1681	1691
PPPGLTNPKP	SSPWSSTAPR	SVRGWGTQDS	RLASASTWSD	GGSVRPSYWL	VLHNLTPQID	GSTLRTICMQ	HGPLLTFHLN	LTQGTALIRY	STKQEAAKAQ
1701	1711	1721	1731	1741	1751	1761	1771	1781	1791
TALHMCVLGN	TTILAEFATD	DEVSRFLAQA	QPPTPAATPS	APAAGWQSLE	TGQNQSDPVG	PALNLFGGST	GLGQWSSSAG	GSSGADLAGA	SLWGPPNYSS
1801	1811	1821	1831
SLWGVPTVED	PHRMGSPAPL	LPGDLLGGGS	DSI

UniProtKB-Q9UPQ9

Glycosites

Sequence

Reference

ID	Publication
1	Sun S, Shah P, Eshghi ST, Yang W, Trikannad N, Yang S, Chen L, Aiyetan P, Hoti N, Zhang Z, et al: Comprehensive analysis of protein glycosylation by solid-phase extraction of N-linked glycans and glycosite-containing peptides. Nat Biotech 2015, advance online publication.
8	Ma C, Zhang Q, Qu JY, Zhao XY, Li X, Liu YP, Wang PG: A precise approach in large scale core-fucosylated glycoprotein identification with low- and high-normalized collision energy. Journal of Proteomics 2015, 114:61-70.